The shamrock SPH model. More...

#include <shammodels/sph/include/shammodels/sph/Model.hpp>

Collaboration diagram for shammodels::sph::Model< Tvec, SPHKernel >:

Public Types
using	Tscal = shambase::VecComponent<Tvec>
using	Kernel = SPHKernel<Tscal>
using	Solver = Solver<Tvec, SPHKernel>
using	SolverConfig = typename Solver::Config

Public Member Functions
	Model (ShamrockCtx &ctx)
void	init ()
	Initialise the model and all the related data structures (patch scheduler in particular).
void	init_scheduler (u32 crit_split, u32 crit_merge)
template<std::enable_if_t< dim==3, int > = 0>
Tvec	get_box_dim_fcc_3d (Tscal dr, u32 xcnt, u32 ycnt, u32 zcnt)
void	set_cfl_cour (Tscal cfl_cour)
void	set_cfl_force (Tscal cfl_force)
void	set_eta_sink (Tscal eta_sink)
void	set_particle_mass (Tscal gpart_mass)
Tscal	get_particle_mass ()
void	resize_simulation_box (std::pair< Tvec, Tvec > box)
SolverConfig	gen_config_from_phantom_dump (PhantomDump &phdump, bool bypass_error)
void	init_from_phantom_dump (PhantomDump &phdump, Tscal hpart_fact_load=1.0)
PhantomDump	make_phantom_dump ()
void	do_vtk_dump (std::string filename, bool add_patch_world_id)
void	set_debug_dump (bool _do_debug_dump, std::string _debug_dump_filename)
u64	get_total_part_count ()
f64	total_mass_to_part_mass (f64 totmass)
Tscal	get_hfact ()
Tscal	rho_h (Tscal h)
void	add_cube_fcc_3d (Tscal dr, std::pair< Tvec, Tvec > _box)
void	add_cube_hcp_3d (Tscal dr, std::pair< Tvec, Tvec > _box)
void	add_cube_hcp_3d_v2 (Tscal dr, std::pair< Tvec, Tvec > _box)
std::unique_ptr< modules::SPHSetup< Tvec, SPHKernel > >	get_setup ()
void	add_big_disc_3d (Tvec center, Tscal central_mass, u32 Npart, Tscal r_in, Tscal r_out, Tscal disc_mass, Tscal p, Tscal H_r_in, Tscal q, std::mt19937 eng)
void	add_sink (Tscal mass, Tvec pos, Tvec velocity, Tscal accretion_radius)
template<class T>
void	set_field_value_lambda (std::string field_name, const std::function< T(Tvec)> pos_to_val, const u32 offset)
template<class T>
void	overwrite_field_value (std::string field_name, const std::function< std::vector< T >(py::dict)> field_compute, const u32 offset)
template<std::enable_if_t< dim==3, int > = 0>
Tscal	add_disc_3d (Tvec center, Tscal central_mass, u32 Npart, Tscal r_in, Tscal r_out, Tscal disc_mass, Tscal p, Tscal H_r_in, Tscal q)
	Add a disc distribution.
template<std::enable_if_t< dim==3, int > = 0>
void	add_cube_disc_3d (Tvec center, u32 Npart, Tscal p, Tscal rho_0, Tscal m, Tscal r_in, Tscal r_out, Tscal q, Tscal cmass)
void	remap_positions (std::function< Tvec(Tvec)> map)
void	push_particle (std::vector< Tvec > &part_pos_insert, std::vector< Tscal > &part_hpart_insert, std::vector< Tscal > &part_u_insert)
void	push_particle_mhd (std::vector< Tvec > &part_pos_insert, std::vector< Tscal > &part_hpart_insert, std::vector< Tscal > &part_u_insert, std::vector< Tvec > &part_B_on_rho_insert, std::vector< Tscal > &part_psi_on_ch_insert)
template<class T>
void	set_value_in_a_box (std::string field_name, T val, std::pair< Tvec, Tvec > box, u32 ivar)
template<class T>
void	set_value_in_sphere (std::string field_name, T val, Tvec center, Tscal radius)
template<class T>
void	add_kernel_value (std::string field_name, T val, Tvec center, Tscal h_ker)
template<class T>
T	get_sum (std::string name)
Tvec	get_closest_part_to (Tvec pos)
void	apply_momentum_offset (Tvec offset)
void	apply_position_offset (Tvec offset)
void	set_solver_config (typename Solver::Config cfg)
f64	solver_logs_last_rate ()
u64	solver_logs_last_obj_count ()
f64	solver_logs_cumulated_step_time ()
void	solver_logs_reset_cumulated_step_time ()
u64	solver_logs_step_count ()
void	solver_logs_reset_step_count ()
void	change_htolerances (Tscal in_coarse, Tscal in_fine)
void	load_from_dump (std::string fname)
	Load the state of the SPH model from a dump file.
void	dump (std::string fname)
	Dump the state of the SPH model to a file.
f64	evolve_once_time_expl (f64 t_curr, f64 dt_input)
TimestepLog	timestep ()
void	evolve_once ()
EvolveUntilResults	evolve_until (Tscal target_time, i32 niter_max, f64 max_walltime=-1)

Public Attributes
ShamrockCtx &	ctx
Solver	solver

Static Public Attributes
static constexpr u32	dim = shambase::VectorProperties<Tvec>::dimension

Detailed Description

template<class Tvec, template< class > class SPHKernel>
class shammodels::sph::Model< Tvec, SPHKernel >

The shamrock SPH model.

Template Parameters

Tvec
SPHKernel

Definition at line 55 of file Model.hpp.

Member Typedef Documentation

◆ Kernel

template<class Tvec, template< class > class SPHKernel>

using shammodels::sph::Model< Tvec, SPHKernel >::Kernel = SPHKernel<Tscal>

Definition at line 59 of file Model.hpp.

◆ Solver

template<class Tvec, template< class > class SPHKernel>

using shammodels::sph::Model< Tvec, SPHKernel >::Solver = Solver<Tvec, SPHKernel>

Definition at line 61 of file Model.hpp.

◆ SolverConfig

template<class Tvec, template< class > class SPHKernel>

using shammodels::sph::Model< Tvec, SPHKernel >::SolverConfig = typename Solver::Config

Definition at line 62 of file Model.hpp.

◆ Tscal

template<class Tvec, template< class > class SPHKernel>

using shammodels::sph::Model< Tvec, SPHKernel >::Tscal = shambase::VecComponent<Tvec>

Definition at line 57 of file Model.hpp.

Constructor & Destructor Documentation

◆ Model()

template<class Tvec, template< class > class SPHKernel>

shammodels::sph::Model< Tvec, SPHKernel >::Model ( ShamrockCtx & ctx )

inline

Definition at line 71 of file Model.hpp.

Member Function Documentation

◆ add_big_disc_3d()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::add_big_disc_3d	(	Tvec	center,
		Tscal	central_mass,
		u32	Npart,
		Tscal	r_in,
		Tscal	r_out,
		Tscal	disc_mass,
		Tscal	p,
		Tscal	H_r_in,
		Tscal	q,
		std::mt19937	eng )

Definition at line 829 of file Model.cpp.

◆ add_cube_disc_3d()

template<class Tvec, template< class > class SPHKernel>

template<std::enable_if_t< dim==3, int > = 0>

void shammodels::sph::Model< Tvec, SPHKernel >::add_cube_disc_3d	(	Tvec	center,
		u32	Npart,
		Tscal	p,
		Tscal	rho_0,
		Tscal	m,
		Tscal	r_in,
		Tscal	r_out,
		Tscal	q,
		Tscal	cmass )

inline

Definition at line 483 of file Model.hpp.

◆ add_cube_fcc_3d()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::add_cube_fcc_3d	(	Tscal	dr,
		std::pair< Tvec, Tvec >	_box )

Definition at line 1082 of file Model.cpp.

◆ add_cube_hcp_3d()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::add_cube_hcp_3d	(	Tscal	dr,
		std::pair< Tvec, Tvec >	_box )

Definition at line 469 of file Model.cpp.

◆ add_cube_hcp_3d_v2()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::add_cube_hcp_3d_v2	(	Tscal	dr,
		std::pair< Tvec, Tvec >	_box )

Definition at line 595 of file Model.cpp.

◆ add_disc_3d()

template<class Tvec, template< class > class SPHKernel>

template<std::enable_if_t< dim==3, int > = 0>

Tscal shammodels::sph::Model< Tvec, SPHKernel >::add_disc_3d	(	Tvec	center,
		Tscal	central_mass,
		u32	Npart,
		Tscal	r_in,
		Tscal	r_out,
		Tscal	disc_mass,
		Tscal	p,
		Tscal	H_r_in,
		Tscal	q )

inline

Add a disc distribution.

Parameters

center	position of the center of the disc
central_mass	star mass
Npart	number of particles
r_in	inner radius
r_out	outer radius
disc_mass	disc mass
p	density power profile
H_r_in	inner radisu H/r
q	soundspeed power profile

Returns: Tscal

Definition at line 282 of file Model.hpp.

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◆ add_kernel_value()

template<class Tvec, template< class > class SPHKernel>

template<class T>

void shammodels::sph::Model< Tvec, SPHKernel >::add_kernel_value	(	std::string	field_name,
		T	val,
		Tvec	center,
		Tscal	h_ker )

inline

Definition at line 723 of file Model.hpp.

◆ add_sink()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::add_sink	(	Tscal	mass,
		Tvec	pos,
		Tvec	velocity,
		Tscal	accretion_radius )

inline

Definition at line 174 of file Model.hpp.

◆ apply_momentum_offset()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::apply_momentum_offset ( Tvec offset )

inline

Definition at line 772 of file Model.hpp.

◆ apply_position_offset()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::apply_position_offset ( Tvec offset )

inline

Definition at line 814 of file Model.hpp.

◆ change_htolerances()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::change_htolerances	(	Tscal	in_coarse,
		Tscal	in_fine )

inline

Definition at line 863 of file Model.hpp.

◆ do_vtk_dump()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::do_vtk_dump	(	std::string	filename,
		bool	add_patch_world_id )

inline

Definition at line 116 of file Model.hpp.

◆ dump()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::dump ( std::string fname )

inline

Dump the state of the SPH model to a file.

Parameters

fname The name of the dump file.

TODO: replace supplied metadata by solver config json

Definition at line 924 of file Model.hpp.

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◆ evolve_once()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::evolve_once ( )

inline

Definition at line 954 of file Model.hpp.

◆ evolve_once_time_expl()

template<class Tvec, template< class > class SPHKernel>

f64 shammodels::sph::Model< Tvec, SPHKernel >::evolve_once_time_expl	(	f64	t_curr,
		f64	dt_input )

Definition at line 44 of file Model.cpp.

◆ evolve_until()

template<class Tvec, template< class > class SPHKernel>

EvolveUntilResults shammodels::sph::Model< Tvec, SPHKernel >::evolve_until	(	Tscal	target_time,
		i32	niter_max,
		f64	max_walltime = -1 )

inline

Definition at line 959 of file Model.hpp.

◆ gen_config_from_phantom_dump()

template<class Tvec, template< class > class SPHKernel>

auto shammodels::sph::Model< Tvec, SPHKernel >::gen_config_from_phantom_dump	(	PhantomDump &	phdump,
		bool	bypass_error )

Definition at line 1192 of file Model.cpp.

◆ get_box_dim_fcc_3d()

template<class Tvec, template< class > class SPHKernel>

template<std::enable_if_t< dim==3, int > = 0>

Tvec shammodels::sph::Model< Tvec, SPHKernel >::get_box_dim_fcc_3d	(	Tscal	dr,
		u32	xcnt,
		u32	ycnt,
		u32	zcnt )

inline

Definition at line 89 of file Model.hpp.

◆ get_closest_part_to()

template<class Tvec, template< class > class SPHKernel>

auto shammodels::sph::Model< Tvec, SPHKernel >::get_closest_part_to ( Tvec pos )

Definition at line 97 of file Model.cpp.

◆ get_hfact()

template<class Tvec, template< class > class SPHKernel>

Tscal shammodels::sph::Model< Tvec, SPHKernel >::get_hfact ( )

inline

Definition at line 128 of file Model.hpp.

◆ get_particle_mass()

template<class Tvec, template< class > class SPHKernel>

Tscal shammodels::sph::Model< Tvec, SPHKernel >::get_particle_mass ( )

inline

Definition at line 106 of file Model.hpp.

◆ get_setup()

template<class Tvec, template< class > class SPHKernel>

std::unique_ptr< modules::SPHSetup< Tvec, SPHKernel > > shammodels::sph::Model< Tvec, SPHKernel >::get_setup ( )

inline

Definition at line 138 of file Model.hpp.

◆ get_sum()

template<class Tvec, template< class > class SPHKernel>

template<class T>

T shammodels::sph::Model< Tvec, SPHKernel >::get_sum ( std::string name )

inline

Definition at line 754 of file Model.hpp.

◆ get_total_part_count()

template<class Tvec, template< class > class SPHKernel>

u64 shammodels::sph::Model< Tvec, SPHKernel >::get_total_part_count ( )

Definition at line 86 of file Model.cpp.

◆ init()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::init ( )

Initialise the model and all the related data structures (patch scheduler in particular).

Definition at line 56 of file Model.cpp.

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◆ init_from_phantom_dump()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::init_from_phantom_dump	(	PhantomDump &	phdump,
		Tscal	hpart_fact_load = 1.0 )

Definition at line 1214 of file Model.cpp.

◆ init_scheduler()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::init_scheduler	(	u32	crit_split,
		u32	crit_merge )

inline

Old way of doing it, for backward compatibility it just overrides the values in the config before calling init()

Definition at line 82 of file Model.hpp.

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◆ load_from_dump()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::load_from_dump ( std::string fname )

inline

Load the state of the SPH model from a dump file.

Parameters

fname The name of the dump file.

TODO: load solver config from metadata

Definition at line 885 of file Model.hpp.

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◆ make_phantom_dump()

template<class Tvec, template< class > class SPHKernel>

shammodels::sph::PhantomDump shammodels::sph::Model< Tvec, SPHKernel >::make_phantom_dump ( )

Definition at line 1480 of file Model.cpp.

◆ overwrite_field_value()

template<class Tvec, template< class > class SPHKernel>

template<class T>

void shammodels::sph::Model< Tvec, SPHKernel >::overwrite_field_value	(	std::string	field_name,
		const std::function< std::vector< T >(py::dict)>	field_compute,
		const u32	offset )

inline

Definition at line 223 of file Model.hpp.

◆ push_particle()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::push_particle	(	std::vector< Tvec > &	part_pos_insert,
		std::vector< Tscal > &	part_hpart_insert,
		std::vector< Tscal > &	part_u_insert )

Definition at line 267 of file Model.cpp.

◆ push_particle_mhd()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::push_particle_mhd	(	std::vector< Tvec > &	part_pos_insert,
		std::vector< Tscal > &	part_hpart_insert,
		std::vector< Tscal > &	part_u_insert,
		std::vector< Tvec > &	part_B_on_rho_insert,
		std::vector< Tscal > &	part_psi_on_ch_insert )

Definition at line 357 of file Model.cpp.

◆ remap_positions()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::remap_positions ( std::function< Tvec(Tvec)> map )

Definition at line 146 of file Model.cpp.

◆ resize_simulation_box()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::resize_simulation_box ( std::pair< Tvec, Tvec > box )

inline

Definition at line 108 of file Model.hpp.

◆ rho_h()

template<class Tvec, template< class > class SPHKernel>

Tscal shammodels::sph::Model< Tvec, SPHKernel >::rho_h ( Tscal h )

inline

Definition at line 130 of file Model.hpp.

◆ set_cfl_cour()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::set_cfl_cour ( Tscal cfl_cour )

inline

Definition at line 93 of file Model.hpp.

◆ set_cfl_force()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::set_cfl_force ( Tscal cfl_force )

inline

Definition at line 96 of file Model.hpp.

◆ set_debug_dump()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::set_debug_dump	(	bool	_do_debug_dump,
		std::string	_debug_dump_filename )

inline

Definition at line 120 of file Model.hpp.

◆ set_eta_sink()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::set_eta_sink ( Tscal eta_sink )

inline

Definition at line 99 of file Model.hpp.

◆ set_field_value_lambda()

template<class Tvec, template< class > class SPHKernel>

template<class T>

void shammodels::sph::Model< Tvec, SPHKernel >::set_field_value_lambda	(	std::string	field_name,
		const std::function< T(Tvec)>	pos_to_val,
		const u32	offset )

inline

Definition at line 186 of file Model.hpp.

◆ set_particle_mass()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::set_particle_mass ( Tscal gpart_mass )

inline

Definition at line 102 of file Model.hpp.

◆ set_solver_config()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::set_solver_config ( typename Solver::Config cfg )

inline

Definition at line 843 of file Model.hpp.

◆ set_value_in_a_box()

template<class Tvec, template< class > class SPHKernel>

template<class T>

void shammodels::sph::Model< Tvec, SPHKernel >::set_value_in_a_box	(	std::string	field_name,
		T	val,
		std::pair< Tvec, Tvec >	box,
		u32	ivar )

inline

Definition at line 652 of file Model.hpp.

◆ set_value_in_sphere()

template<class Tvec, template< class > class SPHKernel>

template<class T>

void shammodels::sph::Model< Tvec, SPHKernel >::set_value_in_sphere	(	std::string	field_name,
		T	val,
		Tvec	center,
		Tscal	radius )

inline

Definition at line 691 of file Model.hpp.

◆ solver_logs_cumulated_step_time()

template<class Tvec, template< class > class SPHKernel>

f64 shammodels::sph::Model< Tvec, SPHKernel >::solver_logs_cumulated_step_time ( )

inline

Definition at line 854 of file Model.hpp.

◆ solver_logs_last_obj_count()

template<class Tvec, template< class > class SPHKernel>

u64 shammodels::sph::Model< Tvec, SPHKernel >::solver_logs_last_obj_count ( )

inline

Definition at line 853 of file Model.hpp.

◆ solver_logs_last_rate()

template<class Tvec, template< class > class SPHKernel>

f64 shammodels::sph::Model< Tvec, SPHKernel >::solver_logs_last_rate ( )

inline

Definition at line 852 of file Model.hpp.

◆ solver_logs_reset_cumulated_step_time()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::solver_logs_reset_cumulated_step_time ( )

inline

Definition at line 857 of file Model.hpp.

◆ solver_logs_reset_step_count()

template<class Tvec, template< class > class SPHKernel>

void shammodels::sph::Model< Tvec, SPHKernel >::solver_logs_reset_step_count ( )

inline

Definition at line 861 of file Model.hpp.

◆ solver_logs_step_count()

template<class Tvec, template< class > class SPHKernel>

u64 shammodels::sph::Model< Tvec, SPHKernel >::solver_logs_step_count ( )

inline

Definition at line 860 of file Model.hpp.

◆ timestep()

template<class Tvec, template< class > class SPHKernel>

shammodels::sph::TimestepLog shammodels::sph::Model< Tvec, SPHKernel >::timestep ( )

Definition at line 51 of file Model.cpp.

◆ total_mass_to_part_mass()

template<class Tvec, template< class > class SPHKernel>

f64 shammodels::sph::Model< Tvec, SPHKernel >::total_mass_to_part_mass ( f64 totmass )

Definition at line 92 of file Model.cpp.

Member Data Documentation

◆ ctx

template<class Tvec, template< class > class SPHKernel>

ShamrockCtx& shammodels::sph::Model< Tvec, SPHKernel >::ctx

Definition at line 65 of file Model.hpp.

◆ dim

template<class Tvec, template< class > class SPHKernel>

u32 shammodels::sph::Model< Tvec, SPHKernel >::dim = shambase::VectorProperties<Tvec>::dimension

staticconstexpr

Definition at line 58 of file Model.hpp.

◆ solver

template<class Tvec, template< class > class SPHKernel>

Solver shammodels::sph::Model< Tvec, SPHKernel >::solver

Definition at line 67 of file Model.hpp.

The documentation for this class was generated from the following files:

shammodels/sph/include/shammodels/sph/Model.hpp
shammodels/sph/src/Model.cpp

Public Types

Public Member Functions

Public Attributes

Static Public Attributes

Detailed Description

Member Typedef Documentation

◆ Kernel

◆ Solver

◆ SolverConfig

◆ Tscal

Constructor & Destructor Documentation

◆ Model()

Member Function Documentation

◆ add_big_disc_3d()

◆ add_cube_disc_3d()

◆ add_cube_fcc_3d()

◆ add_cube_hcp_3d()

◆ add_cube_hcp_3d_v2()

◆ add_disc_3d()

◆ add_kernel_value()

◆ add_sink()

◆ apply_momentum_offset()

◆ apply_position_offset()

◆ change_htolerances()

◆ do_vtk_dump()

◆ dump()

◆ evolve_once()

◆ evolve_once_time_expl()

◆ evolve_until()

◆ gen_config_from_phantom_dump()

◆ get_box_dim_fcc_3d()

◆ get_closest_part_to()

◆ get_hfact()

◆ get_particle_mass()

◆ get_setup()

◆ get_sum()

◆ get_total_part_count()

◆ init()

◆ init_from_phantom_dump()

◆ init_scheduler()

◆ load_from_dump()

◆ make_phantom_dump()

◆ overwrite_field_value()

◆ push_particle()

◆ push_particle_mhd()

◆ remap_positions()

◆ resize_simulation_box()

◆ rho_h()

◆ set_cfl_cour()

◆ set_cfl_force()

◆ set_debug_dump()

◆ set_eta_sink()

◆ set_field_value_lambda()

◆ set_particle_mass()

◆ set_solver_config()

◆ set_value_in_a_box()

◆ set_value_in_sphere()

◆ solver_logs_cumulated_step_time()

◆ solver_logs_last_obj_count()

◆ solver_logs_last_rate()

◆ solver_logs_reset_cumulated_step_time()

◆ solver_logs_reset_step_count()

◆ solver_logs_step_count()

◆ timestep()

◆ total_mass_to_part_mass()

Member Data Documentation

◆ ctx

◆ dim

◆ solver